Aquatic Genomics Research Platform
Welcome to the Standard Operating Procedures (SOPs) for the Aquatic Genomics Research Platform (AGRP) at the South African Institute for Aquatic Biodiversity (SAIAB).
This site contains step-by-step protocols for all bioinformatics workflows used by the group.
Categories
- HPC — SLURM job submission, conda environments
- Genome Assembly — Nanopore QC, assembly polishing
- eDNA Metabarcoding — CRABS, QIIME2
- Data Management — Data policy
Tip
Use the search bar at the top to find any protocol quickly.